A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 9401 - 9500:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PSMB7 ENSSSCG00000005590 1:280011355-280074547    
PSMB8 ENSSSCG00000001461 7:29329049-29437913    
PSMB9 ENSSSCG00000001463 7:29342791-29347827 CU633196,CH242-203E5,7:29272940-29352095
(Clone quality: bE203E5 on chr=7; Num_of_Contigs=1; ) 		 
PSMB9 ENSSSCG00000001468 7:29448026-29453222 BX323833,PigI-554F3,7:29352096-29473578
(No clone quality info on bS554F3) 		 
PSMC1 ENSSSCG00000002433 7:119883741-119903775   CT737375,CH242-180K22,7:119862665-119936789
(Clone quality: bE180K22 on chr=7; Num_of_Contigs=5; )
PSMC2 ENSSSCG00000015424 9:96405054-96417850   CU570825,CH242-232P7,9:96290209-96447239
(Clone quality: bE232P7 on chr=9; Num_of_Contigs=1; )
PSMC3 ENSSSCG00000013239 2:13291220-13296948   CU856312,CH242-38I7,2:13257671-13307229
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
PSMC3 ENSSSCG00000017396 12:17801019-17806889   FP016109,CH242-242A5,12:17788506-17858714
(Clone quality: bE242A5 on chr=12; Num_of_Contigs=4; )
PSMC3IP   ENSSSCG00000017396 12:17801019-17806889   FP016109,CH242-242A5,12:17788506-17858714
(Clone quality: bE242A5 on chr=12; Num_of_Contigs=4; )
PSMC5 ENSSSCG00000017287 12:12674651-12679025   CU466386,CH242-271O11,12:12667512-12704427
(Clone quality: bE271O11 on chr=12; Num_of_Contigs=5; )
PSMC6 ENSSSCG00000005038 1:190796275-190822069   CU407115,CH242-342H5,1:190778660-191001332
(Clone quality: bE342H5 on chr=1; Num_of_Contigs=1; )
PSMD1 ENSSSCG00000016272 15:124295482-124399326    
PSMD10 ENSSSCG00000012568 X:86716313-86724005   CU463012,CH242-276J1,X:86710402-86732969
(Clone quality: bE276J1 on chr=X; Num_of_Contigs=7; )
PSMD11 ENSSSCG00000017731 12:40189932-40217280    
PSMD12 ENSSSCG00000017273 12:11715356-11739908    
PSMD13 ENSSSCG00000014559 2:139858756-139872960   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
PSMD14 ENSSSCG00000015892 15:63447033-63473533   CU571357,CH242-300O22,15:63426524-63482865
(Clone quality: bE300O22 on chr=15; Num_of_Contigs=9; )
PSMD3 ENSSSCG00000017489 12:20307259-20323043   CU928026,CH242-256H23,12:20268098-20354915
(Clone quality: bE256H23 on chr=12; Num_of_Contigs=2; )
PSMD4 ENSSSCG00000006628 4:101948354-101986654 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; ) 		 
PSMD5 ENSSSCG00000005507 1:274385760-274439465    
PSMD6   ENSSSCG00000011494 13:38360227-38380942    
PSMD8 ENSSSCG00000002956 6:32498417-32505467   FP236590,CH242-507G2,6:32461085-32547641
(Clone quality: bE507G2 on chr=6; Num_of_Contigs=4; )
PSMD9 ENSSSCG00000009804 14:30848711-30876075   CT737291,CH242-160P22,14:30791235-30951915
(Clone quality: bE160P22 on chr=14; Num_of_Contigs=1; )
PSME1 ENSSSCG00000002006 7:81502652-81505393   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
PSME2 ENSSSCG00000002004 7:81495365-81498701   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
PSME3 ENSSSCG00000017385 12:17629889-17636034   CU928483,CH242-17I6,12:17616365-17641383
(Clone quality: bE17I6 on chr=12; Num_of_Contigs=8; )
PSME4 ENSSSCG00000008412 3:81171082-81235690   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
PSMF1 ENSSSCG00000007195 17:35875525-35917096    
PSMG3   ENSSSCG00000007556 3:696931-699425   FP103050,CH242-177C19,3:686945-709629
(Clone quality: bE177C19 on chr=3; Num_of_Contigs=4; )
PSMG4   ENSSSCG00000001005 7:2770951-2778573   CT990543,CH242-241I16,7:2753264-2800733
(Clone quality: bE241I16 on chr=7; Num_of_Contigs=5; )
PSORS1C2 ENSSSCG00000001390 7:27498491-27499664 CT737281,CH242-102G9,7:27394698-27581746
(Clone quality: bE102G9 on chr=7; Num_of_Contigs=3; ) 		 
PSPC1   ENSSSCG00000009569 11:79406293-79433949    
PSPH ENSSSCG00000007259 17:38609213-38620092   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSPH ENSSSCG00000007259 17:38609213-38620092   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PSPH ENSSSCG00000007748 3:15429790-15455799    
PSPN ENSSSCG00000013540 2:49836016-49836312   CU929921,CH242-352E11,2:49825944-49850143
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
PSPN ENSSSCG00000013540 2:49836016-49836312   CU929921,CH242-352E11,2:49825944-49850143
(Clone quality: bE352E11 on chr=2; Num_of_Contigs=12; )
PSRC1   ENSSSCG00000006832 4:115304886-115308436   CU207229,CH242-373I13,4:115300001-115308788
(Clone quality: bE373I13 on chr=4; Num_of_Contigs=14; )
PSTK   ENSSSCG00000010721 14:138975726-138987606   CT956005,CH242-11G17,14:138966488-139020350
(Clone quality: bE11G17 on chr=14; Num_of_Contigs=9; )
PSTPIP1 ENSSSCG00000001867 7:62397796-62440268   CT868718,CH242-524I20,7:62378964-62491858
(Clone quality: bE524I20 on chr=7; Num_of_Contigs=2; )
PSTPIP2 ENSSSCG00000004495 1:99408731-99417141   CU855986,CH242-171G22,1:99401398-99424779
(Clone quality: bE171G22 on chr=1; Num_of_Contigs=18; )
PTAFR ENSSSCG00000003625 6:62008694-62009722   FP236290,CH242-238K2,6:62005001-62016209
(Clone quality: bE238K2 on chr=6; Num_of_Contigs=9; )
PTAR1   ENSSSCG00000005252 1:233568627-233620820    
PTBP1   ENSSSCG00000013421 2:46234083-46244876    
PTBP2   ENSSSCG00000006880 4:125830478-125837924    
PTCD1   ENSSSCG00000007622 3:5836439-5846668   FP102617,CH242-199P18,3:5834883-5866455
(Clone quality: bE199P18 on chr=3; Num_of_Contigs=6; )
PTCD2   ENSSSCG00000016975 16:46039843-46092746    
PTCD3   ENSSSCG00000008225 3:53542683-53578492   CU570839,CH242-286N20,3:53540211-53717808
(Clone quality: bE286N20 on chr=3; Num_of_Contigs=1; )
PTCHD1   ENSSSCG00000012170 X:18312969-18364243    
PTCHD2   ENSSSCG00000003417 6:48397874-48489261    
PTCRA   ENSSSCG00000001650 7:43853027-43859109 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
PTDSS1   ENSSSCG00000006089 4:40685100-40693748   CU463146,CH242-381B20,4:40683877-40696118
(Clone quality: bE381B20 on chr=4; Num_of_Contigs=11; )
PTEN ENSSSCG00000003506 6:54215030-54329215    
PTEN ENSSSCG00000010440 14:104786815-104878376    
PTEN ENSSSCG00000013226 2:13068848-13074399   CU856103,CH242-271O6,2:12985573-13119992
(Clone quality: bE271O6 on chr=2; Num_of_Contigs=3; )
PTER   ENSSSCG00000011044 10:43512198-43519179    
PTF-BETA ENSSSCG00000016522 18:10629256-10718361    
PTGDR ENSSSCG00000005031 1:190214029-190221736   CU571369,CH242-523L1,1:190155010-190315370
(Clone quality: bE523L1 on chr=1; Num_of_Contigs=2; )
PTGER1 ENSSSCG00000013782 2:57305113-57306333   FP103015,CH242-135B13,2:57305111-57311746
(Clone quality: bE135B13 on chr=2; Num_of_Contigs=14; )
PTGER3 ENSSSCG00000003788 6:99719587-99802331    
PTGES3 ENSSSCG00000000406 5:21082002-21102681   CU468457,CH242-203P23,5:21058663-21129178
(Clone quality: bE203P23 on chr=5; Num_of_Contigs=4; )
PTGFR ENSSSCG00000003764 6:93814979-93858324    
PTGFRN ENSSSCG00000006735 4:107859868-107904918    
PTGIS   ENSSSCG00000007463 17:53354140-53397753    
PTGR1 ENSSSCG00000005461 1:265325397-265327678   CU928768,CH242-206J15,1:265322512-265329305
(Clone quality: bE206J15 on chr=1; Num_of_Contigs=17; )
PTGR2   ENSSSCG00000002351 7:105188719-105210057    
PTGS1 ENSSSCG00000005533 1:276223853-276249153   CU210908,CH242-184P19,1:276194297-276251264
(Clone quality: bE184P19 on chr=1; Num_of_Contigs=5; )
PTGS1 ENSSSCG00000005533 1:276223853-276249153   CU210908,CH242-184P19,1:276194297-276251264
(Clone quality: bE184P19 on chr=1; Num_of_Contigs=5; )
PTGS2 ENSSSCG00000015579 9:120143783-120152326   CU640376,CH242-149O22,9:120036039-120178014
(Clone quality: bE149O22 on chr=9; Num_of_Contigs=1; )
PTH ENSSSCG00000013394 2:42712290-42715312   FP067371,CH242-200E20,2:42683050-42718299
(Clone quality: bE200E20 on chr=2; Num_of_Contigs=7; )
PTH1R   ENSSSCG00000011326 13:24757645-24783308    
PTH2   ENSSSCG00000003171 6:38037835-38038710    
PTH2R   ENSSSCG00000016148 15:104467991-104527478    
PTHLH ENSSSCG00000000544 5:44375746-44387876    
PTK2 ENSSSCG00000005931 4:1573343-1582321    
PTK2B ENSSSCG00000009664 14:11248055-11313269    
PTK7 ENSSSCG00000001660 7:44023413-44051991    
PTMS ENSSSCG00000000689 5:59974471-59977966    
PTN ENSSSCG00000016522 18:10629256-10718361    
PTOV1   ENSSSCG00000003196 6:38493509-38501623   CU694867,CH242-269H19,6:38488706-38576788
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
PTP4A2 ENSSSCG00000003605 6:60649606-60660132    
PTPDC1   ENSSSCG00000008083 3:38401323-38495784    
PTPLA   ENSSSCG00000011035 10:42118966-42191896    
PTPLAD1   ENSSSCG00000004935 1:170629212-170669040   CU463002,CH242-312G12,1:170566222-170696309
(Clone quality: bE312G12 on chr=1; Num_of_Contigs=4; )
PTPLAD2   ENSSSCG00000005164 1:210650171-210672959   CU407268,CH242-471I15,1:210647629-210684078
(Clone quality: bE471I15 on chr=1; Num_of_Contigs=19; )
PTPMT1   ENSSSCG00000013226 2:13068848-13074399   CU856103,CH242-271O6,2:12985573-13119992
(Clone quality: bE271O6 on chr=2; Num_of_Contigs=3; )
PTPN1 ENSSSCG00000007469 17:54211406-54281046    
PTPN12 ENSSSCG00000015411 9:95427072-95467282   CU862033,CH242-157L15,9:95425990-95572442
(Clone quality: bE157L15 on chr=9; Num_of_Contigs=2; )
PTPN14 ENSSSCG00000015582 9:121678361-121730182    
PTPN18   ENSSSCG00000015735 15:29037050-29056732    
PTPN21 ENSSSCG00000002425 7:118245871-118318622    
PTPN22 ENSSSCG00000006764 4:111066816-111117519    
PTPN23   ENSSSCG00000011338 13:25331710-25340317   CU633348,CH242-158N8,13:25277659-25344664
(Clone quality: bE158N8 on chr=13; Num_of_Contigs=9; )
PTPN4 ENSSSCG00000015743 15:29500425-29714051    
PTPN5   ENSSSCG00000013358 2:37675894-37692393   CU915335,CH242-299H5,2:37673371-37742014
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
PTPN9 ENSSSCG00000001878 7:63302924-63419418    
PTPNS1 ENSSSCG00000007181 17:35100996-35142659   CU076083,CH242-165N9,17:35094633-35142680
(Clone quality: bE165N9 on chr=17; Num_of_Contigs=11; )
PTPRA ENSSSCG00000007166 17:34211675-34370646    
PTPRB ENSSSCG00000000504 5:33526871-33623177    
PTPRCAP ENSSSCG00000012909 2:3468942-3469568   CU633429,CH242-6G2,2:3468458-3486670
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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