A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 26101 - 26165:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MUC5AC location ⇒ 13:18910343-18910426   CU464076,CH242-481B9,13:18898351-18944492
(Clone quality: bE481B9 on chr=13; Num_of_Contigs=5; )
MUC5AC location ⇒ 13:18910694-18910851   CU464076,CH242-481B9,13:18898351-18944492
(Clone quality: bE481B9 on chr=13; Num_of_Contigs=5; )
NALP1 location ⇒ 1:165316993-165316653   CU694588,CH242-25E9,1:165295255-165318637
(Clone quality: bE25E9 on chr=1; Num_of_Contigs=5; )
NALP1 location ⇒ 1:165317235-165317073   CU694588,CH242-25E9,1:165295255-165318637
(Clone quality: bE25E9 on chr=1; Num_of_Contigs=5; )
NALP1 location ⇒ 1:165482112-165482245   CU075404,CH242-152D17,1:165478890-165574835
(Clone quality: bE152D17 on chr=1; Num_of_Contigs=4; )
NP_954660 location ⇒ 5:15008005-15007644   CU856260,CH242-249K5,5:14983385-15022104
(Clone quality: bE249K5 on chr=5; Num_of_Contigs=8; )
NP_954660 location ⇒ 5:15015839-15015625   CU856260,CH242-249K5,5:14983385-15022104
(Clone quality: bE249K5 on chr=5; Num_of_Contigs=8; )
OLF42-3 location ⇒ 7:24995255-24995209   CU651654,CH242-447F13,7:24956886-25020051
(Clone quality: bE447F13 on chr=7; Num_of_Contigs=3; )
OLF42-3 location ⇒ 7:25177055-25177101 CU498964,CH242-369A8,7:25131774-25305454
(Clone quality: bE369A8 on chr=7; Num_of_Contigs=2; ) 		 
OLF42-3 location ⇒ 7:25663228-25663182 CU041263,CH242-137G6,7:25493319-25683154
(Clone quality: bE137G6 on chr=7; Num_of_Contigs=4; ) 		 
OLF42-3 location ⇒ 7:85607263-85607201   CU468932,CH242-104D4,7:85535313-85664937
(Clone quality: bE104D4 on chr=7; Num_of_Contigs=4; )
PLEKHC110979 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
pPGRP-LB location ⇒ 2:60368411-60368363   CU914413,CH242-247L20,2:60356868-60368411
(Clone quality: bE247L20 on chr=2; Num_of_Contigs=8; )
PR39 location ⇒ 13:26044977-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PR39 location ⇒ 13:26045596-26045381   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PSCD2L location ⇒ 6:37498145-37498285   FP102301,CH242-20J11,6:37475901-37499164
(Clone quality: bE20J11 on chr=6; Note=In Finishing;)
PSCD2L location ⇒ 6:37502362-37502513   FP102301,CH242-20J11,6:37499265-37520560
(Clone quality: bE20J11 on chr=6; Note=In Finishing;)
PSCD2L location ⇒ 6:37506210-37506365   FP102301,CH242-20J11,6:37499265-37520560
(Clone quality: bE20J11 on chr=6; Note=In Finishing;)
PSCD2L location ⇒ 6:37506455-37506715   FP102301,CH242-20J11,6:37499265-37520560
(Clone quality: bE20J11 on chr=6; Note=In Finishing;)
PTCH location ⇒ 18:17609120-17609012   CU638846,CH242-272C14,18:17604734-17699485
(Clone quality: bE272C14 on chr=18; Num_of_Contigs=4; )
PTCH location ⇒ 18:17636578-17636506   CU638846,CH242-272C14,18:17604734-17699485
(Clone quality: bE272C14 on chr=18; Num_of_Contigs=4; )
Q6UWH0 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
Q96AQ2 location ⇒ 6:120205649-120206305   CU694684,CH242-210N13,6:120172350-120225775
(Clone quality: bE210N13 on chr=6; Num_of_Contigs=11; )
Q96AQ2 location ⇒ 6:120314458-120313802   FP102012,CH242-136J24,6:120277096-120383099
(Clone quality: bE136J24 on chr=6; Num_of_Contigs=3; )
Q9H0N3 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
Q9NPM1 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
Q9NVL6 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RARRES15918 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RAS location ⇒ 12:49993656-49993723 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RAS location ⇒ 12:49993656-49993734 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RAS location ⇒ 12:49994107-49994232 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RAS location ⇒ 12:49994674-49994739 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
RF00251 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00276 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00282 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
RF00428 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
S100A17 location ⇒ 4:101039712-101039849   CU469439,CH242-256E21,4:100997235-101089062
(Clone quality: bE256E21 on chr=4; Num_of_Contigs=4; )
S100A17 location ⇒ 4:101040350-101042878   CU469439,CH242-256E21,4:100997235-101089062
(Clone quality: bE256E21 on chr=4; Num_of_Contigs=4; )
S100A7c location ⇒ 4:100408553-100408640   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
S100A7c location ⇒ 4:100409924-100409965   FP085472,CH242-106M16,4:100409158-100420698
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
S100A7c location ⇒ 4:100409924-100410085   FP085472,CH242-106M16,4:100409158-100420698
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
S100A7c location ⇒ 4:100419542-100419501   FP085472,CH242-106M16,4:100409158-100420698
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
SAA3 location ⇒ 2:38204745-38204587   CU633234,CH242-198M22,2:38149421-38299309
(Clone quality: bE198M22 on chr=2; Num_of_Contigs=1; )
SAA3 location ⇒ 2:38230861-38230912   CU633234,CH242-198M22,2:38149421-38299309
(Clone quality: bE198M22 on chr=2; Num_of_Contigs=1; )
SAA3 location ⇒ 2:38237850-38237953   CU633234,CH242-198M22,2:38149421-38299309
(Clone quality: bE198M22 on chr=2; Num_of_Contigs=1; )
SAA3 location ⇒ 2:38238731-38238784   CU633234,CH242-198M22,2:38149421-38299309
(Clone quality: bE198M22 on chr=2; Num_of_Contigs=1; )
SKIIP location ⇒ 8:67034638-67034604   FP016091,CH242-139K9,8:67021247-67035165
(Clone quality: bE139K9 on chr=8; Num_of_Contigs=7; )
SLC11A24891 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
SLC31A21318 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
SLC6A126539 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
SLCO1A26579 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
SREBP-1C location ⇒ 12:17948453-17948384   CU914191,CH242-236G5,12:17933540-17951807
(Clone quality: bE236G5 on chr=12; Num_of_Contigs=14; )
SREBP-1C location ⇒ 12:17949674-17949612   CU914191,CH242-236G5,12:17933540-17951807
(Clone quality: bE236G5 on chr=12; Num_of_Contigs=14; )
SREBP-1C location ⇒ 12:18244992-18244923   CU570902,CH242-109J6,12:18227104-18319905
(Clone quality: bE109J6 on chr=12; Num_of_Contigs=7; )
SREBP-1C location ⇒ 12:18246213-18246151   CU570902,CH242-109J6,12:18227104-18319905
(Clone quality: bE109J6 on chr=12; Num_of_Contigs=7; )
SST5 location ⇒ 12:5896792-5896527   CU466404,CH242-455N10,12:5857365-5908364
(Clone quality: bE455N10 on chr=12; Num_of_Contigs=7; )
SWC8 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TCRVB12 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TCRVB4 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TCRVB5 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TCRVB7 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
TCTEL1 location ⇒ 1:9618333-9618267   CU498836,CH242-100E21,1:9618267-9651855
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
TCTEL1 location ⇒ 1:9618693-9618614   CU498836,CH242-100E21,1:9618267-9651855
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
TCTEL1 location ⇒ 1:9619150-9619025   CU498836,CH242-100E21,1:9618267-9651855
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
TCTEL1 location ⇒ 1:9622111-9622067   CU498836,CH242-100E21,1:9618267-9651855
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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