A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MAP3K8 ENSSSCG00000011019 10:38947501-38962030   CU929949,CH242-512G24,10:38946072-38974272
(Clone quality: bE512G24 on chr=10; Num_of_Contigs=8; )
MAP3K8 location ⇒ 10:38946964-38946858   CU929949,CH242-512G24,10:38946072-38974272
(Clone quality: bE512G24 on chr=10; Num_of_Contigs=8; )
MAP3K8 location ⇒ 10:38947762-38947500   CU929949,CH242-512G24,10:38946072-38974272
(Clone quality: bE512G24 on chr=10; Num_of_Contigs=8; )
MAP3K8 location ⇒ 10:38951778-38951617   CU929949,CH242-512G24,10:38946072-38974272
(Clone quality: bE512G24 on chr=10; Num_of_Contigs=8; )
MAP3K9 ENSSSCG00000002329 7:102813720-102825107   CU469452,CH242-138O16,7:102787273-102827779
(Clone quality: bE138O16 on chr=7; Num_of_Contigs=9; )
MAP4 ENSSSCG00000011343 13:25658238-25867334    
MAP4K1 ENSSSCG00000002962 6:32666729-32683162    
MAP4K1 location ⇒ 6:32677120-32677039   FP245504,CH242-1N8,6:32676604-32681115
(Clone quality: bE1N8 on chr=6; Num_of_Contigs=9; )
MAP4K1 location ⇒ 6:32677460-32677344   FP245504,CH242-1N8,6:32676604-32681115
(Clone quality: bE1N8 on chr=6; Num_of_Contigs=9; )
MAP4K1 location ⇒ 6:32678017-32677935   FP245504,CH242-1N8,6:32676604-32681115
(Clone quality: bE1N8 on chr=6; Num_of_Contigs=9; )
MAP4K1 location ⇒ 6:32678737-32678605   FP245504,CH242-1N8,6:32676604-32681115
(Clone quality: bE1N8 on chr=6; Num_of_Contigs=9; )
MAP4K2 ENSSSCG00000013020 2:5767117-5778518    
MAP4K2 location ⇒ 2:5772468-5772578 FP101995,CH242-228D7,2:5766547-5776364
(Clone quality: bE228D7 on chr=2; Num_of_Contigs=13; ) 		 
MAP4K2 location ⇒ 2:5772959-5773043 FP101995,CH242-228D7,2:5766547-5776364
(Clone quality: bE228D7 on chr=2; Num_of_Contigs=13; ) 		 
MAP4K2 location ⇒ 2:5773131-5773211 FP101995,CH242-228D7,2:5766547-5776364
(Clone quality: bE228D7 on chr=2; Num_of_Contigs=13; ) 		 
MAP4K2 location ⇒ 2:5773453-5773574 FP101995,CH242-228D7,2:5766547-5776364
(Clone quality: bE228D7 on chr=2; Num_of_Contigs=13; ) 		 
MAP4K3 ENSSSCG00000008475 3:94030657-94097563    
MAP4K3 location ⇒ 3:94110363-94110307   CU468089,CH242-299M9,3:94109669-94115144
(Clone quality: bE299M9 on chr=3; Num_of_Contigs=15; )
MAP4K3 location ⇒ 3:94112844-94112767   CU468089,CH242-299M9,3:94109669-94115144
(Clone quality: bE299M9 on chr=3; Num_of_Contigs=15; )
MAP4K3 location ⇒ 3:94115358-94115266   CU468089,CH242-299M9,3:94115245-94134568
(Clone quality: bE299M9 on chr=3; Num_of_Contigs=15; )
MAP4K3 location ⇒ 3:94118958-94118787   CU468089,CH242-299M9,3:94115245-94134568
(Clone quality: bE299M9 on chr=3; Num_of_Contigs=15; )
MAP4K4 ENSSSCG00000008164 3:48133556-48177028    
MAP4K4 location ⇒ 3:48137868-48137693   CU862006,CH242-65L22,3:48112666-48152051
(Clone quality: bE65L22 on chr=3; Num_of_Contigs=8; )
MAP4K4 location ⇒ 3:48141535-48141400   CU862006,CH242-65L22,3:48112666-48152051
(Clone quality: bE65L22 on chr=3; Num_of_Contigs=8; )
MAP4K4 location ⇒ 3:48146412-48146267   CU862006,CH242-65L22,3:48112666-48152051
(Clone quality: bE65L22 on chr=3; Num_of_Contigs=8; )
MAP4K4 location ⇒ 3:48150981-48150809   CU862006,CH242-65L22,3:48112666-48152051
(Clone quality: bE65L22 on chr=3; Num_of_Contigs=8; )
MAP6   ENSSSCG00000014860 9:9486821-9612745    
MAP6D1   ENSSSCG00000011778 13:92218668-92219418   CU633652,CH242-198K22,13:92200389-92223480
(Clone quality: bE198K22 on chr=13; Num_of_Contigs=12; )
MAP7   ENSSSCG00000004162 1:29148371-29203318    
MAP7D1   ENSSSCG00000003637 6:62664348-62674657   CU929602,CH242-252C17,6:62645300-62678915
(Clone quality: bE252C17 on chr=6; Num_of_Contigs=6; )
MAP7D2   ENSSSCG00000012161 X:15266360-15356445    
MAP7D3   ENSSSCG00000012700 X:109510319-109578614   CU856459,CH242-124I21,X:109501603-109629045
(Clone quality: bE124I21 on chr=X; Num_of_Contigs=4; )
MAP9   ENSSSCG00000008852 8:36751146-36804430    
MAPK1 ENSSSCG00000010081 14:51213645-51236463   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
MAPK1 location ⇒ 14:130390929-130391259   CU019667,CH242-264H11,14:130338198-130508081
(Clone quality: bE264H11 on chr=14; Num_of_Contigs=1; )
MAPK1 location ⇒ 14:51160266-51158830   CU657961,CH242-203J11,14:51140075-51170438
(Clone quality: bE203J11 on chr=14; Num_of_Contigs=17; )
MAPK1 location ⇒ 14:51237750-51239186   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
MAPK10 ENSSSCG00000009228 8:113837962-113973958    
MAPK10 location ⇒ 8:113974118-113974661   CU928561,CH242-312I18,8:113948231-113984608
(Clone quality: bE312I18 on chr=8; Num_of_Contigs=2; )
MAPK10 location ⇒ 8:114089234-114089777   CU928517,CH242-197B22,8:114053117-114099146
(Clone quality: bE197B22 on chr=8; Num_of_Contigs=9; )
MAPK11 location ⇒ 7:36408968-36409043   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK11 location ⇒ 7:36459845-36459921   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK12 location ⇒ 7:36454306-36454377   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK13 ENSSSCG00000001557 7:36453326-36462109   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK13 location ⇒ 7:36454277-36454409   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK13 location ⇒ 7:36459807-36459923   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK13 location ⇒ 7:36461385-36461562   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK13 location ⇒ 7:36461781-36462107   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK14 ENSSSCG00000001556 7:36390606-36431910   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK14 location ⇒ 7:36431846-36432035   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-46

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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