A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LEMD1 ENSSSCG00000015291 9:63301248-63306608   FP102849,CH242-21K8,9:63285211-63309914
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
LEMD1 location ⇒ 9:63305514-63305392   FP102849,CH242-21K8,9:63285211-63309914
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
LEMD1 location ⇒ 9:63306647-63306527   FP102849,CH242-21K8,9:63285211-63309914
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
LEMD2   ENSSSCG00000001520 7:34388866-34404425 CU481857,CH242-122A6,7:34237512-34415946
(Clone quality: bE122A6 on chr=7; Num_of_Contigs=5; ) 		 
LEMD3 ENSSSCG00000000469 5:29310864-29381426    
LENEP   ENSSSCG00000006537 4:98912243-98912428   CU207227,CH242-365J2,4:98889060-98947503
(Clone quality: bE365J2 on chr=4; Num_of_Contigs=9; )
LENG1   ENSSSCG00000003265 6:40579884-40584902   FP102634,CH242-226O14,6:40573969-40593437
(Clone quality: bE226O14 on chr=6; Num_of_Contigs=5; )
LENG4 ENSSSCG00000003267 6:40600423-40615739   FP102634,CH242-226O14,6:40593538-40615982
(Clone quality: bE226O14 on chr=6; Num_of_Contigs=5; )
LENG8 ENSSSCG00000003270 6:40638178-40644379    
LENG9   ENSSSCG00000003269 6:40633897-40635447   CU914171,CH242-113P17,6:40632735-40638880
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LEO1   ENSSSCG00000004625 1:124668854-124921995    
LEP ENSSSCG00000016588 18:18350544-18353678   CU655914,CH242-239N7,18:18347914-18354220
(Clone quality: bE239N7 on chr=18; Num_of_Contigs=16; )
LEP location ⇒ 18:12258441-12258346   FP015781,CH242-4D7,18:12210462-12270304
(Clone quality: bE4D7 on chr=18; Num_of_Contigs=13; )
LEP location ⇒ 18:23287779-23287674 CU463080,CH242-269N20,18:23159073-23362655
(Clone quality: bE269N20 on chr=18; Num_of_Contigs=11; ) 		 
LEP location ⇒ 18:4644392-4644295   CU929780,CH242-369P20,18:4635348-4660486
(Clone quality: bE369P20 on chr=18; Num_of_Contigs=4; )
LEP location ⇒ 18:51429235-51429181   CU655978,CH242-170J15,18:51382351-51457200
(Clone quality: bE170J15 on chr=18; Num_of_Contigs=4; )
LEPREL1   ENSSSCG00000011813 13:96215323-96423327    
LEPROT   ENSSSCG00000003806 6:103462536-103475163   FP015946,CH242-451F13,6:103394120-103571822
(Clone quality: bE451F13 on chr=6; Num_of_Contigs=1; )
LETM1   ENSSSCG00000008675 8:95058-121224   FP102127,CH242-261D5,8:90818-123852
(Clone quality: bE261D5 on chr=8; Num_of_Contigs=8; )
LETM2   ENSSSCG00000015816 15:45666776-45685312   CU571183,CH242-123D14,15:45574115-45718238
(Clone quality: bE123D14 on chr=15; Num_of_Contigs=2; )
LFNG   ENSSSCG00000007572 3:1905471-1908075   FP102725,CH242-525I24,3:1904180-1908140
(Clone quality: bE525I24 on chr=3; Note=un_improved;)
LGALS1 ENSSSCG00000000125 5:6692961-6696870   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6693166-6693016   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6693636-6693460   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6695057-6694978   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6695057-6694978   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS12   ENSSSCG00000013056 2:6994423-7192719    
LGALS3 ENSSSCG00000005055 1:193056011-193073504    
LGALS3 location ⇒ 1:193056013-193056102   CU855754,CH242-58I7,1:193052707-193060550
(Clone quality: bE58I7 on chr=1; Num_of_Contigs=12; )
LGALS3 location ⇒ 1:193065029-193065383   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
LGALS3 location ⇒ 1:193071494-193071665   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
LGALS3 location ⇒ 1:193073183-193073470   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
LGALS3BP location ⇒ 12:12677-12604 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
LGALS3BP location ⇒ 12:14319-14428 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
LGALS3BP location ⇒ 12:1731-1658 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
LGALS3BP location ⇒ 12:537-630 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
LGALS3BP location ⇒ X:12937671-12937591   CU207390,CH242-65K12,X:12858474-12986868
(Clone quality: bE65K12 on chr=X; Num_of_Contigs=4; )
LGALS3BP location ⇒ X:1708066-1708150 FP102438,CH242-227G12,X:1614901-1722511
(Clone quality: bE227G12 on chr=X; Num_of_Contigs=2; ) 		 
LGALS3BP location ⇒ X:38104890-38105018   FP085368,CH242-98A23,X:38103663-38126519
(Clone quality: bE98A23 on chr=X; Num_of_Contigs=4; )
LGALS3BP location ⇒ X:38413174-38413302   FP015835,CH242-515P8,X:38411628-38434861
(Clone quality: bE515P8 on chr=X; Num_of_Contigs=5; )
LGALS8 ENSSSCG00000010146 14:56077905-56097931   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56077936-56078130   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56080822-56080988   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56084242-56084365   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56085924-56086105   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGI1   ENSSSCG00000010481 14:110500492-110531532   CU468486,CH242-341G7,14:110483488-110568591
(Clone quality: bE341G7 on chr=14; Num_of_Contigs=3; )
LGI3   ENSSSCG00000009618 14:6377752-6384806   CT827951,CH242-289H4,14:6374382-6404490
(Clone quality: bE289H4 on chr=14; Num_of_Contigs=6; )
LGMN location ⇒ 7:122198929-122198814   CU571237,CH242-75O20,7:122153470-122210392
(Clone quality: bE75O20 on chr=7; Num_of_Contigs=3; )
LGMN location ⇒ 7:122199828-122199764   CU571237,CH242-75O20,7:122153470-122210392
(Clone quality: bE75O20 on chr=7; Num_of_Contigs=3; )
LGMN location ⇒ 7:122282148-122282212   CU467720,CH242-289F13,7:122278884-122284724
(Clone quality: bE289F13 on chr=7; Num_of_Contigs=18; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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