A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MAGEB10   ENSSSCG00000012193 X:22616919-22617965   CU468992,CH242-238D19,X:22605639-22652274
(Clone quality: bE238D19 on chr=X; Num_of_Contigs=8; )
MAGEB16   ENSSSCG00000012218 X:31251246-31252289 CU928381,CH242-112D2,X:31213123-31338044
(Clone quality: bE112D2 on chr=X; Num_of_Contigs=3; ) 		 
MAGEB3   ENSSSCG00000012198 X:25475798-25476835 CU210921,CH242-476C17,X:25351176-25520153
(Clone quality: bE476C17 on chr=X; Num_of_Contigs=2; ) 		 
MAGEB5   ENSSSCG00000012190 X:21111252-21125479   CU856454,CH242-59H15,X:21073852-21146645
(Clone quality: bE59H15 on chr=X; Num_of_Contigs=3; )
MAGEC1 location ⇒ X:122159012-122158939 CU468868,CH242-187E18,X:122158263-122160319
(Clone quality: bE187E18 on chr=X; Num_of_Contigs=5; ) 		 
MAGED1 ENSSSCG00000012318 X:44747394-44754139   CU207336,CH242-162K6,X:44683966-44799544
(Clone quality: bE162K6 on chr=X; Num_of_Contigs=3; )
MAGED1 location ⇒ X:44748837-44749565   CU207336,CH242-162K6,X:44683966-44799544
(Clone quality: bE162K6 on chr=X; Num_of_Contigs=3; )
MAGED1 location ⇒ X:47251580-47251513   FP091239,CH242-6G17,X:47236645-47316523
(Clone quality: bE6G17 on chr=X; Num_of_Contigs=4; )
MAGED1 location ⇒ X:47379250-47379177   CU928851,CH242-119O9,X:47360054-47409767
(Clone quality: bE119O9 on chr=X; Num_of_Contigs=9; )
MAGED1 location ⇒ X:47456592-47456665   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
MAGED2 ENSSSCG00000012342 X:47250678-47258396   FP091239,CH242-6G17,X:47236645-47316523
(Clone quality: bE6G17 on chr=X; Num_of_Contigs=4; )
MAGED2 location ⇒ X:44753015-44753082   CU207336,CH242-162K6,X:44683966-44799544
(Clone quality: bE162K6 on chr=X; Num_of_Contigs=3; )
MAGED2 location ⇒ X:47379235-47379155   CU928851,CH242-119O9,X:47360054-47409767
(Clone quality: bE119O9 on chr=X; Num_of_Contigs=9; )
MAGED2 location ⇒ X:47453605-47453669   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
MAGED2 location ⇒ X:47456607-47456687   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
MAGEF1   ENSSSCG00000011787 13:92667780-92668727   CU468678,CH242-91H17,13:92661635-92763742
(Clone quality: bE91H17 on chr=13; Num_of_Contigs=2; )
MAGEH1   ENSSSCG00000012350 X:47747275-47747934   FP017286,CH242-152I6,X:47746295-47838855
(Clone quality: bE152I6 on chr=X; Num_of_Contigs=3; )
MAGI1 ENSSSCG00000004071 1:13095284-13138196    
MAGI1 ENSSSCG00000011497 13:39290222-39403689    
MAGI1 location ⇒ 13:39337754-39337585   CU466510,CH242-518I3,13:39331476-39364495
(Clone quality: bE518I3 on chr=13; Num_of_Contigs=8; )
MAGI1 location ⇒ 13:39353818-39353698   CU466510,CH242-518I3,13:39331476-39364495
(Clone quality: bE518I3 on chr=13; Num_of_Contigs=8; )
MAGI1 location ⇒ 13:39665730-39665619   CU928238,CH242-365D21,13:39645715-39686934
(Clone quality: bE365D21 on chr=13; Num_of_Contigs=5; )
MAGI1 location ⇒ 13:39665951-39665802   CU928238,CH242-365D21,13:39645715-39686934
(Clone quality: bE365D21 on chr=13; Num_of_Contigs=5; )
MAGI2   ENSSSCG00000015409 9:95152461-95231104    
MAGI3   ENSSSCG00000006767 4:111240276-111477420    
MAGIX   ENSSSCG00000012295 X:42703203-42706903   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
MAGOH   ENSSSCG00000003849 6:112876457-112886857   FP245512,CH242-182E9,6:112857972-112899203
(Clone quality: bE182E9 on chr=6; Num_of_Contigs=5; )
MAGT1 ENSSSCG00000012435 X:61317871-61413094    
MAGT1 location ⇒ X:61316859-61316361   FP102832,CH242-27L23,X:61314931-61319739
(Clone quality: bE27L23 on chr=X; Num_of_Contigs=12; )
MAGT1 location ⇒ X:61318219-61317781   FP102832,CH242-27L23,X:61314931-61319739
(Clone quality: bE27L23 on chr=X; Num_of_Contigs=12; )
MAGT1 location ⇒ X:61371776-61371278   CU928419,CH242-185D21,X:61368690-61373171
(Clone quality: bE185D21 on chr=X; Num_of_Contigs=9; )
MAGT1 location ⇒ X:61391444-61391380   CU928419,CH242-185D21,X:61386969-61417547
(Clone quality: bE185D21 on chr=X; Num_of_Contigs=9; )
MAK   ENSSSCG00000001042 7:7890126-7945478   CU468900,CH242-267B16,7:7870435-7950293
(Clone quality: bE267B16 on chr=7; Num_of_Contigs=4; )
MAK10   ENSSSCG00000010956 10:28070414-28149829    
MAK16   ENSSSCG00000015832 15:49318428-49327766   FP102412,CH242-94A16,15:49300812-49335243
(Clone quality: bE94A16 on chr=15; Num_of_Contigs=2; )
MAL ENSSSCG00000000075 5:4225678-4243378    
MAL ENSSSCG00000008112 3:41209306-41213988    
MAL ENSSSCG00000008115 3:41326779-41344776   CU582785,CH242-43B1,3:41306831-41344821
(Clone quality: bE43B1 on chr=3; Num_of_Contigs=13; )
MAL ENSSSCG00000006003 4:19339147-19361458   CU463890,CH242-408I20,4:19282446-19434722
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
MAL location ⇒ 3:41326924-41326981   CU582785,CH242-43B1,3:41306831-41344821
(Clone quality: bE43B1 on chr=3; Num_of_Contigs=13; )
MAL location ⇒ 3:41367196-41367562   CU582785,CH242-43B1,3:41348059-41381790
(Clone quality: bE43B1 on chr=3; Num_of_Contigs=13; )
MAL location ⇒ 3:41377818-41377986   CU582785,CH242-43B1,3:41348059-41381790
(Clone quality: bE43B1 on chr=3; Num_of_Contigs=13; )
MAL location ⇒ 3:41379130-41379254   CU582785,CH242-43B1,3:41348059-41381790
(Clone quality: bE43B1 on chr=3; Num_of_Contigs=13; )
MAL2 ENSSSCG00000006003 4:19339147-19361458   CU463890,CH242-408I20,4:19282446-19434722
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
MAL2 location ⇒ 4:19342576-19342444   CU463890,CH242-408I20,4:19282446-19434722
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
MAL2 location ⇒ 4:19346975-19346804   CU463890,CH242-408I20,4:19282446-19434722
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
MAL2 location ⇒ 4:19361306-19361195   CU463890,CH242-408I20,4:19282446-19434722
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
MALL ENSSSCG00000008112 3:41209306-41213988    
MALL location ⇒ 3:1356702-1356594   FP236395,CH242-256N6,3:1352851-1365995
(Clone quality: bE256N6 on chr=3; Num_of_Contigs=10; )
MALL location ⇒ 3:1649463-1649394   FP017146,CH242-87A19,3:1632587-1667477
(Clone quality: bE87A19 on chr=3; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-46

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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