U.S Pig Genome Coordination Program

The Swine Genome Sequencing Consortium

News and Updates (November 24, 2009)

News:
Nov.02,2009: First Draft Of The Pig: Researchers Sequence Swine Genome
May.31,2008: PigTale newsletter, issue 2 for 2008
Nov.01,2007: Pig pre-ensembl release is now live
Jan.13,2006: USDA Awards $10 Million to Sequence Pig Genome
Jul.18,2005: NRI Porcine Genome Sequencing Program
Apr.06,2005: USDA NRI Porcine Genome Sequencing Program RFA
Oct.01,2002: Porcine Genome Sequencing Initiative (White Paper)

Sequencing in Progress — Statistics [ As of 05:09AM on Nov 23, 2009 (Mon) ]

Sanger: In process: 2,880,546,280; Finished: 120,472,403; Total: 3,001,018,683 ( # of nucleotides )

Chromosome	Number of active projects	Number of accessioned projects
U	33	29
1	2019	2013
2	1016	1005
3	942	933
4	946	940
5	743	726
6	962	948
7	931	920
8	927	911
9	971	957
10	507	505
11	566	566
12	414	410
13	1317	1272
14	1026	1021
15	987	975
16	545	540
17	467	462
18	385	380
Total:	16587	16375

Genbank: From Sanger: 438,691; In progress: 495,351; Total: 438,691 ( # of sequences deposited )

The Sequencing Statistics are updated daily ... .

Sequences in the Pipeline:
Browse in pre-Ensembl

For blast on NAGRP Server

Download from - NCBI Trace Archive

- Ensembl Trace Archive

- NCBI FTP site (preliminary assembly)

- Ensembl FTP (preliminary assembly)
New Tools
Related Links:
Swine Genome Sequencing Consortium (SGSC)
SGSC Newsletter - "Pig Tale" ( 1, 2, 3, 4, 5, 6 )
Sanger Institute - Porcine Genome Sequencing Project
Pig Genome Project at NCBI
Pig Genome on NCBI ftp site
Pig Genome on Ensembl
The Sino-Danish Pig Genome Project
Swine Genome Sequencing Consortium: A Strategic Roadmap for Sequencing the Pig Genome

November 24, 2009 (Tuesday)