U.S Pig Genome Coordination Program

The Swine Genome Sequencing Consortium

News and Updates (November 07, 2009)

News:
Nov.02,2009: First Draft Of The Pig: Researchers Sequence Swine Genome
May.31,2008: PigTale newsletter, issue 2 for 2008
Nov.01,2007: Pig pre-ensembl release is now live
Jan.13,2006: USDA Awards $10 Million to Sequence Pig Genome
Jul.18,2005: NRI Porcine Genome Sequencing Program
Apr.06,2005: USDA NRI Porcine Genome Sequencing Program RFA
Oct.01,2002: Porcine Genome Sequencing Initiative (White Paper)

Sequencing in Progress — Statistics [ As of 05:09AM on Nov 07, 2009 (Sat) ]

Sanger: In process: 2,871,271,785; Finished: 120,292,945; Total: 2,991,564,730 ( # of nucleotides )

Chromosome	Number of active projects	Number of accessioned projects
U	33	29
1	2020	2013
2	1017	1005
3	943	931
4	946	940
5	747	726
6	967	948
7	931	920
8	927	909
9	973	941
10	507	497
11	566	561
12	414	400
13	1313	1271
14	1026	1018
15	989	967
16	545	539
17	468	462
18	386	380
Total:	16603	16321

Genbank: From Sanger: 438,646; In progress: 495,350; Total: 438,646 ( # of sequences deposited )

The Sequencing Statistics are updated daily ... .

Sequences in the Pipeline:
Browse in pre-Ensembl

For blast on NAGRP Server

Download from - NCBI Trace Archive

- Ensembl Trace Archive

- NCBI FTP site (preliminary assembly)

- Ensembl FTP (preliminary assembly)
New Tools
Related Links:
Swine Genome Sequencing Consortium (SGSC)
The Sanger Institute
SGSC Newsletter - "Pig Tale" ( 1, 2, 3, 4, 5, 6 )
Pig Genome Project at NCBI
Pig Genome on Ensembl pre!
The Sino-Danish Pig Genome Project
Swine Genome Sequencing Consortium: A Strategic Roadmap for Sequencing the Pig Genome

November 07, 2009 (Saturday)